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Bioinformatics

TimeLogic® Biocomputing Solutions

scalable, high-throughput systems for bioinformatics

With hundreds of next-generation sequencing instruments being used in both large core facilities and small individual research labs, TimeLogic, the bioinformatics brand of Active Motif, knows this increased sequencing throughput requires accelerated computational approaches for elucidating the large volume of sequence data generated from new experimental approaches such as ChIP-Sequencing and small RNA discovery.

TimeLogic enables informatics researchers to accelerate their analysis of the sequence data generated from large-scale sequencing experiments, and offers a variety of computer hardware products ranging from user-friendly CodeQuest™ workstations to multi-server DeCypher® enterprise solutions.
 

CodeQuest™ Biocomputing Workstation

CodeQuest™ is a powerful PC workstation (2 dual-core Xeon CPUs, 1 terabyte of storage, 4 GB RAM) that includes one or two DeCypher Engine™ accelerators to drive the full complement of TimeLogic's accelerated bioinformatics applications. You get answers to comprehensive bioinformatics analyses faster than a cluster of hundreds of CPUs.

CodeQuest draws less electricity than a standard light bulb, requires minimal maintenance, and can sit comfortably on your desk (instead of occupying an entire server room like a cluster). In fact, compared to a 64-CPU cluster, CodeQuest pays for itself in 1 year of power and cooling cost savings.

CodeQuest Workstation Image

With the CodeQuest workstation, you can:

  • Map genomic signatures, SNPs and microarray probes to the genome with high specificity using Tera-Probe™
  • BLAST millions of ESTs to Genbank nt
  • Use Smith-Waterman to identify evolutionarily distant proteins
  • Characterize protein domains into families by searching PFAM, TIGRfam and Superfamily
  • Search your sequences against any public or internal sequence or HMM profile database

PipeWorks Workflow Interface

For a limited time, CodeQuest also includes a license for PipeWorks™, a drag-and-drop workflow interface that lets you easily combine search steps, filters and analysis tools without programming. This automates database updating tasks, and lets you schedule workflow run times so your anntoations are always current. With CodeQuest and PipeWorks, your lab can develop high-throughput genomics workflows to validate your bench science or investigate new research areas.

Request a free TimeLogic® performance benchmark today!

If your genomics team needs additional computing resources, have TimeLogic run one of your larger searches on DeCypher or CodeQuest. It's the best way to evaluate what our accelerated resources can do for your throughput.

Visit www.timelogic.com or contact us for additional information.